BioComp: Bioinformatics protocols at WHOI

Sharon Grim, December 2023

This repository will hold documentation about using common ‘omics analytical tools. Unless otherwise specified, these tools are installed on the Poseidon HPC cluster.

Access the Github Page here: https://whoigit.github.io/biocomp/

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1. Available software on Poseidon
   • Software via Singularity
   • RStudio on the HPC
2. Common analytical workflows for MCG members
   • DESeq for differential expression analysis
   • Example workflow of metagenomics analysis: from raw sequences to genes

3. Other bioinformatics protocols

4. Code snippets